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R Module List of Packages

Option 1 - Within the R prompt​

  1. Module load the version of R you want to use

  2. Load R with the command 'R'

ip <- as.data.frame(installed.packages()[,c(1,3:4)])
rownames(ip) <- NULL
ip <- ip[is.na(ip$Priority),1:2,drop=FALSE]
print(ip, row.names=FALSE)
  1. A list of packages will output to the screen

Option 2 - From the filesystem​

We have provided a script that runs option 1 from the bash prompt:

rpkg <version> [pkg1] ... [pkgN]

where the version is required (e.g. 3.6.2) and the package list is optional. With no explicit packages, all of the installed packages are printed to the terminal.

If there is an R package that you wish to have installed, please send a request to Research Computing via a ticket (see Additional Help below), including the package name and R version.